[04:54:18] Writing local files [04:54:18] Completed 975000 out of 1500000 steps (65%) [05:10:18] Timered checkpoint triggered. [05:20:28] Writing local files [05:20:28] Completed 990000 out of 1500000 steps (66%) [05:36:29] Timered checkpoint triggered. [05:46:37] Writing local files [05:46:37] Completed 1005000 out of 1500000 steps (67%) [06:02:36] Timered checkpoint triggered. [06:12:45] Writing local files [06:12:46] Completed 1020000 out of 1500000 steps (68%) [06:28:46] Timered checkpoint triggered. [06:38:57] Writing local files [06:38:57] Completed 1035000 out of 1500000 steps (69%) [06:54:56] Timered checkpoint triggered. [07:05:07] Writing local files [07:05:07] Completed 1050000 out of 1500000 steps (70%) [07:21:07] Timered checkpoint triggered. [07:31:16] Writing local files [07:31:16] Completed 1065000 out of 1500000 steps (71%) [07:47:17] Timered checkpoint triggered. [07:57:25] Writing local files [07:57:25] Completed 1080000 out of 1500000 steps (72%) [08:13:24] Timered checkpoint triggered. [08:23:32] Writing local files [08:23:32] Completed 1095000 out of 1500000 steps (73%) [08:39:33] Timered checkpoint triggered. [08:39:51] - Autosending finished units... [08:39:51] Trying to send all finished work units [08:39:51] + No unsent completed units remaining. [08:39:51] - Autosend completed [08:49:39] Writing local files [08:49:39] Completed 1110000 out of 1500000 steps (74%) [09:05:40] Timered checkpoint triggered. [09:15:45] Writing local files [09:15:45] Completed 1125000 out of 1500000 steps (75%) [09:31:45] Timered checkpoint triggered. [09:41:53] Writing local files [09:41:53] Completed 1140000 out of 1500000 steps (76%) [09:57:54] Timered checkpoint triggered. [10:08:03] Writing local files [10:08:03] Completed 1155000 out of 1500000 steps (77%) [10:24:03] Timered checkpoint triggered. [10:34:11] Writing local files [10:34:11] Completed 1170000 out of 1500000 steps (78%) [10:50:12] Timered checkpoint triggered. [11:00:18] Writing local files [11:00:18] Completed 1185000 out of 1500000 steps (79%) [11:16:19] Timered checkpoint triggered. [11:26:27] Writing local files [11:26:27] Completed 1200000 out of 1500000 steps (80%) [11:42:27] Timered checkpoint triggered. [11:52:34] Writing local files [11:52:34] Completed 1215000 out of 1500000 steps (81%) [12:08:35] Timered checkpoint triggered. [12:18:41] Writing local files [12:18:41] Completed 1230000 out of 1500000 steps (82%) [12:34:41] Timered checkpoint triggered. [12:44:48] Writing local files [12:44:48] Completed 1245000 out of 1500000 steps (83%) [13:00:49] Timered checkpoint triggered. [13:10:57] Writing local files [13:10:57] Completed 1260000 out of 1500000 steps (84%) [13:26:58] Timered checkpoint triggered. [13:37:05] Writing local files [13:37:05] Completed 1275000 out of 1500000 steps (85%) [13:53:06] Timered checkpoint triggered. [14:03:13] Writing local files [14:03:13] Completed 1290000 out of 1500000 steps (86%) [14:19:13] Timered checkpoint triggered. [14:29:23] Writing local files [14:29:23] Completed 1305000 out of 1500000 steps (87%) [14:39:51] - Autosending finished units... [14:39:51] Trying to send all finished work units [14:39:51] + No unsent completed units remaining. [14:39:51] - Autosend completed [14:45:23] Timered checkpoint triggered. [14:55:34] Writing local files [14:55:34] Completed 1320000 out of 1500000 steps (88%) [15:11:34] Timered checkpoint triggered. [15:21:45] Writing local files [15:21:45] Completed 1335000 out of 1500000 steps (89%) [15:37:45] Timered checkpoint triggered. [15:47:54] Writing local files [15:47:54] Completed 1350000 out of 1500000 steps (90%) [16:03:54] Timered checkpoint triggered. [16:14:05] Writing local files [16:14:05] Completed 1365000 out of 1500000 steps (91%) [16:30:04] Timered checkpoint triggered. [16:40:13] Writing local files [16:40:13] Completed 1380000 out of 1500000 steps (92%) [16:56:13] Timered checkpoint triggered. [17:06:19] Writing local files [17:06:19] Completed 1395000 out of 1500000 steps (93%) [17:22:19] Timered checkpoint triggered. [17:32:27] Writing local files [17:32:27] Completed 1410000 out of 1500000 steps (94%) [17:48:27] Timered checkpoint triggered. [17:58:35] Writing local files [17:58:35] Completed 1425000 out of 1500000 steps (95%) [18:14:35] Timered checkpoint triggered. [18:24:44] Writing local files [18:24:44] Completed 1440000 out of 1500000 steps (96%) [18:40:44] Timered checkpoint triggered. [18:50:54] Writing local files [18:50:54] Completed 1455000 out of 1500000 steps (97%) [19:06:54] Timered checkpoint triggered. [19:17:05] Writing local files [19:17:05] Completed 1470000 out of 1500000 steps (98%) [19:33:05] Timered checkpoint triggered. [19:43:15] Writing local files [19:43:15] Completed 1485000 out of 1500000 steps (99%) [19:59:15] Timered checkpoint triggered. [20:09:26] Writing local files [20:09:26] Completed 1500000 out of 1500000 steps (100%) [20:09:26] Writing final coordinates. [20:09:26] Past main M.D. loop [20:10:26] [20:10:26] Finished Work Unit: [20:10:26] - Reading up to 358224 from "work/wudata_08.arc": Read 358224 [20:10:26] - Reading up to 3150328 from "work/wudata_08.xtc": Read 3150328 [20:10:26] goefile size: 0 [20:10:26] logfile size: 14978 [20:10:26] Leaving Run [20:10:27] - Writing 4166810 bytes of core data to disk... [20:10:31] Done: 4166298 -> 3485260 (compressed to 83.6 percent) [20:10:31] ... Done. [20:10:31] - Shutting down core [20:10:31] [20:10:31] Folding@home Core Shutdown: FINISHED_UNIT [20:10:32] CoreStatus = 64 (100) [20:10:32] Unit 8 finished with 96 percent of time to deadline remaining. [20:10:32] Updated performance fraction: 0.973695 [20:10:32] Sending work to server [20:10:32] - Read packet limit of 540015616... Set to 524286976. [20:10:32] + Attempting to send results [20:10:32] - Reading file work/wuresults_08.dat from core [20:10:32] (Read 3485772 bytes from disk) [20:10:32] Connecting to http://171.64.65.111:8080/ [20:10:58] Posted data. [20:10:58] Initial: 0000; - Uploaded at ~126 kB/s [20:10:59] - Averaged speed for that direction ~100 kB/s [20:10:59] + Results successfully sent [20:10:59] Thank you for your contribution to Folding@Home. [20:10:59] + Number of Units Completed: 18 [20:10:59] Trying to send all finished work units [20:10:59] + No unsent completed units remaining. [20:10:59] - Preparing to get new work unit... [20:10:59] + Attempting to get work packet [20:10:59] - Will indicate memory of 241 MB [20:10:59] - Connecting to assignment server [20:10:59] Connecting to http://assign.stanford.edu:8080/ [20:10:59] Posted data. [20:10:59] Initial: E6A9; - Successful: assigned to (169.230.26.30). [20:10:59] + News From Folding@Home: Welcome to Folding@Home [20:11:00] Loaded queue successfully. [20:11:00] Connecting to http://169.230.26.30:8080/ [20:11:00] Posted data. [20:11:00] Initial: 0000; - Receiving payload (expected size: 12366) [20:11:00] Conversation time very short, giving reduced weight in bandwidth avg [20:11:00] - Downloaded at ~24 kB/s [20:11:00] - Averaged speed for that direction ~113 kB/s [20:11:00] + Received work. [20:11:00] Trying to send all finished work units [20:11:00] + No unsent completed units remaining. [20:11:00] + Closed connections [20:11:00] [20:11:00] + Processing work unit [20:11:00] Core required: FahCore_82.exe [20:11:00] Core found. [20:11:00] Working on Unit 09 [November 19 20:11:00] [20:11:00] + Working ... [20:11:00] - Calling './FahCore_82.exe -dir work/ -suffix 09 -checkpoint 15 -forceasm -verbose -lifeline 472 -version 602' [20:11:00] [20:11:00] *------------------------------* [20:11:00] Folding@Home PMD Core [20:11:00] Version 1.03 (September 7, 2005) [20:11:00] [20:11:00] Preparing to commence simulation [20:11:00] - Assembly optimizations manually forced on. [20:11:00] - Not checking prior termination. [20:11:00] - Expanded 11854 -> 73693 (decompressed 621.6 percent) [20:11:00] [20:11:00] Project: 4605 (Run 5, Clone 1, Gen 62) [20:11:00] [20:11:00] Assembly optimizations on if available. [20:11:00] Entering M.D. [20:11:06] Protein: p4605_T0_proA-8_minout [20:11:06] [20:11:06] Completed 0 out of 2500000 steps (0%) [20:14:35] Writing local files [20:14:35] Completed 25000 out of 2500000 steps (1%) [20:18:03] Writing local files [20:18:03] Completed 50000 out of 2500000 steps (2%) [20:18:03] Writing checkpoint files [20:21:31] Writing local files [20:21:31] Completed 75000 out of 2500000 steps (3%) [20:24:59] Writing local files [20:24:59] Completed 100000 out of 2500000 steps (4%) [20:24:59] Writing checkpoint files [20:28:27] Writing local files [20:28:27] Completed 125000 out of 2500000 steps (5%) [20:31:52] Writing local files [20:31:52] Completed 150000 out of 2500000 steps (6%) [20:31:52] Writing checkpoint files [20:35:17] Writing local files [20:35:17] Completed 175000 out of 2500000 steps (7%) [20:38:43] Writing local files [20:38:43] Completed 200000 out of 2500000 steps (8%) [20:38:43] Writing checkpoint files [20:39:51] - Autosending finished units... [20:39:51] Trying to send all finished work units [20:39:51] + No unsent completed units remaining. [20:39:51] - Autosend completed [20:42:08] Writing local files [20:42:08] Completed 225000 out of 2500000 steps (9%) [20:45:36] Writing local files [20:45:36] Completed 250000 out of 2500000 steps (10%) [20:45:36] Writing checkpoint files [20:48:49] Writing local files [20:48:49] Completed 275000 out of 2500000 steps (11%) [20:51:53] Writing local files [20:51:53] Completed 300000 out of 2500000 steps (12%) [20:51:53] Writing checkpoint files [20:54:57] Writing local files [20:54:57] Completed 325000 out of 2500000 steps (13%) [20:58:01] Writing local files [20:58:01] Completed 350000 out of 2500000 steps (14%) [20:58:01] Writing checkpoint files [21:01:08] Writing local files [21:01:08] Completed 375000 out of 2500000 steps (15%) [21:04:14] Writing local files [21:04:14] Completed 400000 out of 2500000 steps (16%) [21:04:14] Writing checkpoint files [21:07:20] Writing local files [21:07:20] Completed 425000 out of 2500000 steps (17%) [21:10:27] Writing local files [21:10:27] Completed 450000 out of 2500000 steps (18%) [21:10:27] Writing checkpoint files [21:13:35] Writing local files [21:13:35] Completed 475000 out of 2500000 steps (19%) [21:16:44] Writing local files [21:16:44] Completed 500000 out of 2500000 steps (20%) [21:16:44] Writing checkpoint files [21:19:50] Writing local files [21:19:50] Completed 525000 out of 2500000 steps (21%) [21:22:54] Writing local files [21:22:54] Completed 550000 out of 2500000 steps (22%) [21:22:54] Writing checkpoint files [21:25:56] Writing local files [21:25:56] Completed 575000 out of 2500000 steps (23%) [21:28:56] Writing local files [21:28:56] Completed 600000 out of 2500000 steps (24%) [21:28:56] Writing checkpoint files [21:32:00] Writing local files [21:32:00] Completed 625000 out of 2500000 steps (25%) [21:35:16] Writing local files [21:35:16] Completed 650000 out of 2500000 steps (26%) [21:35:16] Writing checkpoint files [21:38:39] Writing local files [21:38:39] Completed 675000 out of 2500000 steps (27%) [21:42:12] Writing local files [21:42:12] Completed 700000 out of 2500000 steps (28%) [21:42:12] Writing checkpoint files [21:45:43] Writing local files [21:45:43] Completed 725000 out of 2500000 steps (29%) [21:49:17] Writing local files [21:49:17] Completed 750000 out of 2500000 steps (30%) [21:49:17] Writing checkpoint files [21:52:52] Writing local files [21:52:52] Completed 775000 out of 2500000 steps (31%) [21:56:27] Writing local files [21:56:27] Completed 800000 out of 2500000 steps (32%) [21:56:27] Writing checkpoint files [22:00:05] Writing local files [22:00:05] Completed 825000 out of 2500000 steps (33%) [22:03:44] Writing local files [22:03:44] Completed 850000 out of 2500000 steps (34%) [22:03:44] Writing checkpoint files [22:07:20] Writing local files [22:07:20] Completed 875000 out of 2500000 steps (35%) [22:10:54] Writing local files [22:10:54] Completed 900000 out of 2500000 steps (36%) [22:10:54] Writing checkpoint files [22:14:27] Writing local files [22:14:27] Completed 925000 out of 2500000 steps (37%) [22:18:03] Writing local files [22:18:03] Completed 950000 out of 2500000 steps (38%) [22:18:03] Writing checkpoint files [22:21:38] Writing local files [22:21:38] Completed 975000 out of 2500000 steps (39%) [22:25:14] Writing local files [22:25:14] Completed 1000000 out of 2500000 steps (40%) [22:25:14] Writing checkpoint files [22:28:51] Writing local files [22:28:51] Completed 1025000 out of 2500000 steps (41%) [22:32:14] Writing local files [22:32:14] Completed 1050000 out of 2500000 steps (42%) [22:32:14] Writing checkpoint files [22:35:36] Writing local files [22:35:36] Completed 1075000 out of 2500000 steps (43%) [22:39:12] Writing local files [22:39:12] Completed 1100000 out of 2500000 steps (44%) [22:39:12] Writing checkpoint files [22:42:47] Writing local files [22:42:47] Completed 1125000 out of 2500000 steps (45%) [22:46:22] Writing local files [22:46:22] Completed 1150000 out of 2500000 steps (46%) [22:46:22] Writing checkpoint files [22:49:57] Writing local files [22:49:57] Completed 1175000 out of 2500000 steps (47%) [22:53:29] Writing local files [22:53:29] Completed 1200000 out of 2500000 steps (48%) [22:53:29] Writing checkpoint files [22:57:01] Writing local files [22:57:01] Completed 1225000 out of 2500000 steps (49%) [23:00:31] Writing local files [23:00:31] Completed 1250000 out of 2500000 steps (50%) [23:00:31] Writing checkpoint files [23:03:58] Writing local files [23:03:58] Completed 1275000 out of 2500000 steps (51%) [23:07:25] Writing local files [23:07:25] Completed 1300000 out of 2500000 steps (52%) [23:07:25] Writing checkpoint files [23:10:57] Writing local files [23:10:57] Completed 1325000 out of 2500000 steps (53%) [23:14:16] Writing local files [23:14:16] Completed 1350000 out of 2500000 steps (54%) [23:14:16] Writing checkpoint files [23:17:31] Writing local files [23:17:31] Completed 1375000 out of 2500000 steps (55%) [23:20:52] Writing local files [23:20:52] Completed 1400000 out of 2500000 steps (56%) [23:20:52] Writing checkpoint files [23:24:12] Writing local files [23:24:12] Completed 1425000 out of 2500000 steps (57%) [23:27:32] Writing local files [23:27:32] Completed 1450000 out of 2500000 steps (58%) [23:27:32] Writing checkpoint files [23:30:52] Writing local files [23:30:52] Completed 1475000 out of 2500000 steps (59%) [23:34:15] Writing local files [23:34:15] Completed 1500000 out of 2500000 steps (60%) [23:34:15] Writing checkpoint files [23:37:35] Writing local files [23:37:35] Completed 1525000 out of 2500000 steps (61%) [23:40:57] Writing local files [23:40:57] Completed 1550000 out of 2500000 steps (62%) [23:40:57] Writing checkpoint files [23:44:18] Writing local files [23:44:18] Completed 1575000 out of 2500000 steps (63%) [23:47:35] Writing local files [23:47:35] Completed 1600000 out of 2500000 steps (64%) [23:47:35] Writing checkpoint files [23:50:39] Writing local files [23:50:39] Completed 1625000 out of 2500000 steps (65%) [23:53:41] Writing local files [23:53:41] Completed 1650000 out of 2500000 steps (66%) [23:53:41] Writing checkpoint files [23:56:41] Writing local files [23:56:41] Completed 1675000 out of 2500000 steps (67%) [23:59:37] Writing local files [23:59:37] Completed 1700000 out of 2500000 steps (68%) [23:59:37] Writing checkpoint files [00:02:35] Writing local files [00:02:35] Completed 1725000 out of 2500000 steps (69%) [00:05:38] Writing local files [00:05:38] Completed 1750000 out of 2500000 steps (70%) [00:05:38] Writing checkpoint files [00:08:46] Writing local files [00:08:46] Completed 1775000 out of 2500000 steps (71%) [00:11:55] Writing local files [00:11:55] Completed 1800000 out of 2500000 steps (72%) [00:11:55] Writing checkpoint files [00:15:03] Writing local files [00:15:03] Completed 1825000 out of 2500000 steps (73%) [00:18:23] Writing local files [00:18:23] Completed 1850000 out of 2500000 steps (74%) [00:18:23] Writing checkpoint files [00:21:28] Writing local files [00:21:28] Completed 1875000 out of 2500000 steps (75%) [00:24:31] Writing local files [00:24:31] Completed 1900000 out of 2500000 steps (76%) [00:24:31] Writing checkpoint files [00:27:35] Writing local files [00:27:35] Completed 1925000 out of 2500000 steps (77%) [00:30:29] Writing local files [00:30:29] Completed 1950000 out of 2500000 steps (78%) [00:30:29] Writing checkpoint files [00:33:24] Writing local files [00:33:24] Completed 1975000 out of 2500000 steps (79%) [00:36:27] Writing local files [00:36:27] Completed 2000000 out of 2500000 steps (80%) [00:36:27] Writing checkpoint files [00:39:29] Writing local files [00:39:29] Completed 2025000 out of 2500000 steps (81%) [00:42:27] Writing local files [00:42:27] Completed 2050000 out of 2500000 steps (82%) [00:42:27] Writing checkpoint files [00:45:23] Writing local files [00:45:23] Completed 2075000 out of 2500000 steps (83%) [00:48:19] Writing local files [00:48:19] Completed 2100000 out of 2500000 steps (84%) [00:48:19] Writing checkpoint files [00:51:14] Writing local files [00:51:14] Completed 2125000 out of 2500000 steps (85%) [00:54:08] Writing local files [00:54:08] Completed 2150000 out of 2500000 steps (86%) [00:54:08] Writing checkpoint files [00:57:00] Writing local files [00:57:00] Completed 2175000 out of 2500000 steps (87%) [00:59:51] Writing local files [00:59:51] Completed 2200000 out of 2500000 steps (88%) [00:59:51] Writing checkpoint files [01:02:43] Writing local files [01:02:43] Completed 2225000 out of 2500000 steps (89%) [01:05:40] Writing local files [01:05:40] Completed 2250000 out of 2500000 steps (90%) [01:05:40] Writing checkpoint files [01:08:41] Writing local files [01:08:41] Completed 2275000 out of 2500000 steps (91%) [01:11:38] Writing local files [01:11:38] Completed 2300000 out of 2500000 steps (92%) [01:11:38] Writing checkpoint files [01:14:38] Writing local files [01:14:38] Completed 2325000 out of 2500000 steps (93%) [01:17:36] Writing local files [01:17:36] Completed 2350000 out of 2500000 steps (94%) [01:17:36] Writing checkpoint files [01:20:34] Writing local files [01:20:34] Completed 2375000 out of 2500000 steps (95%) [01:23:30] Writing local files [01:23:30] Completed 2400000 out of 2500000 steps (96%) [01:23:30] Writing checkpoint files [01:26:26] Writing local files [01:26:26] Completed 2425000 out of 2500000 steps (97%) [01:29:22] Writing local files [01:29:22] Completed 2450000 out of 2500000 steps (98%) [01:29:22] Writing checkpoint files [01:32:18] Writing local files [01:32:18] Completed 2475000 out of 2500000 steps (99%) [01:35:16] Writing local files [01:35:16] Completed 2500000 out of 2500000 steps (100%) [01:35:16] Writing checkpoint files [01:36:16] [01:36:16] Finished Work Unit: [01:36:16] Leaving Run [01:36:20] - Writing 216480 bytes of core data to disk... [01:36:20] ... Done. [01:36:20] - Shutting down core [01:36:20] [01:36:20] Folding@home Core Shutdown: FINISHED_UNIT [01:36:20] CoreStatus = 64 (100) [01:36:20] Unit 9 finished with 98 percent of time to deadline remaining. [01:36:20] Updated performance fraction: 0.975426 [01:36:20] Sending work to server [01:36:20] - Read packet limit of 540015616... Set to 524286976. [01:36:20] + Attempting to send results [01:36:20] - Reading file work/wuresults_09.dat from core [01:36:20] (Read 216480 bytes from disk) [01:36:20] Connecting to http://169.230.26.30:8080/ [01:36:22] Posted data. [01:36:22] Initial: 0000; - Uploaded at ~106 kB/s [01:36:22] - Averaged speed for that direction ~101 kB/s [01:36:22] + Results successfully sent [01:36:22] Thank you for your contribution to Folding@Home. [01:36:22] + Number of Units Completed: 19 [01:36:22] Trying to send all finished work units [01:36:22] + No unsent completed units remaining. [01:36:22] - Preparing to get new work unit... [01:36:22] + Attempting to get work packet [01:36:22] - Will indicate memory of 241 MB [01:36:22] - Connecting to assignment server [01:36:22] Connecting to http://assign.stanford.edu:8080/ [01:36:22] Posted data. [01:36:22] Initial: 40AB; - Successful: assigned to (171.64.65.111). [01:36:22] + News From Folding@Home: Welcome to Folding@Home [01:36:22] Loaded queue successfully. [01:36:22] Connecting to http://171.64.65.111:8080/ [01:36:23] Posted data. [01:36:23] Initial: 0000; - Receiving payload (expected size: 438316) [01:36:25] - Downloaded at ~214 kB/s [01:36:25] - Averaged speed for that direction ~133 kB/s [01:36:25] + Received work. [01:36:25] Trying to send all finished work units [01:36:25] + No unsent completed units remaining. [01:36:25] + Closed connections [01:36:25] [01:36:25] + Processing work unit [01:36:25] Core required: FahCore_81.exe [01:36:25] Core found. [01:36:25] Working on Unit 00 [November 20 01:36:25] [01:36:25] + Working ... [01:36:25] - Calling './FahCore_81.exe -dir work/ -suffix 00 -checkpoint 15 -forceasm -verbose -lifeline 472 -version 602' [01:36:25] [01:36:25] *------------------------------* [01:36:25] Folding@Home Gromacs Simulated Tempering Core [01:36:25] Version 1.00 (Dec 9, 2006) [01:36:25] [01:36:25] Preparing to commence simulation [01:36:25] - Assembly optimizations manually forced on. [01:36:25] - Not checking prior termination. [01:36:26] - Expanded 437804 -> 2160354 (decompressed 493.4 percent) [01:36:26] - Starting from initial work packet [01:36:26] [01:36:26] Project: 4111 (Run 4, Clone 11, Gen 31) [01:36:26] [01:36:26] Assembly optimizations on if available. [01:36:26] Entering M.D. [01:36:32] Protein: p4111_ntl9_unf_Amber03_Extended [01:36:32] [01:36:32] Writing local files [01:36:32] Extra SSE boost OK. [01:36:32] Writing local files [01:36:32] Completed 0 out of 1500000 steps (0%) [01:52:25] Timered checkpoint triggered. [02:02:55] Writing local files [02:02:55] Completed 15000 out of 1500000 steps (1%) [02:18:56] Timered checkpoint triggered. [02:29:20] Writing local files [02:29:20] Completed 30000 out of 1500000 steps (2%) [02:39:51] - Autosending finished units... [02:39:51] Trying to send all finished work units [02:39:51] + No unsent completed units remaining. [02:39:51] - Autosend completed [02:45:20] Timered checkpoint triggered. [02:55:43] Writing local files [02:55:43] Completed 45000 out of 1500000 steps (3%) [03:11:44] Timered checkpoint triggered. [03:22:05] Writing local files [03:22:05] Completed 60000 out of 1500000 steps (4%) [03:38:06] Timered checkpoint triggered. [03:48:28] Writing local files [03:48:28] Completed 75000 out of 1500000 steps (5%) [04:04:29] Timered checkpoint triggered. [04:14:51] Writing local files [04:14:51] Completed 90000 out of 1500000 steps (6%) [04:30:51] Timered checkpoint triggered. [04:41:14] Writing local files [04:41:14] Completed 105000 out of 1500000 steps (7%) [04:57:15] Timered checkpoint triggered. [05:07:36] Writing local files [05:07:36] Completed 120000 out of 1500000 steps (8%) [05:23:37] Timered checkpoint triggered. [05:33:58] Writing local files [05:33:58] Completed 135000 out of 1500000 steps (9%) [05:49:58] Timered checkpoint triggered. [06:00:19] Writing local files [06:00:19] Completed 150000 out of 1500000 steps (10%) [06:16:20] Timered checkpoint triggered. [06:26:41] Writing local files [06:26:41] Completed 165000 out of 1500000 steps (11%) [06:42:42] Timered checkpoint triggered. [06:53:02] Writing local files [06:53:02] Completed 180000 out of 1500000 steps (12%) [07:09:03] Timered checkpoint triggered. [07:19:26] Writing local files [07:19:26] Completed 195000 out of 1500000 steps (13%) [07:35:27] Timered checkpoint triggered. [07:45:50] Writing local files [07:45:50] Completed 210000 out of 1500000 steps (14%) [08:01:51] Timered checkpoint triggered. [08:12:13] Writing local files [08:12:13] Completed 225000 out of 1500000 steps (15%) [08:28:14] Timered checkpoint triggered. [08:38:34] Writing local files [08:38:34] Completed 240000 out of 1500000 steps (16%) [08:39:51] - Autosending finished units... [08:39:51] Trying to send all finished work units [08:39:51] + No unsent completed units remaining. [08:39:51] - Autosend completed [08:54:35] Timered checkpoint triggered. [09:04:56] Writing local files [09:04:56] Completed 255000 out of 1500000 steps (17%) [09:20:57] Timered checkpoint triggered. [09:31:19] Writing local files [09:31:19] Completed 270000 out of 1500000 steps (18%) [09:47:18] Timered checkpoint triggered. [09:57:42] Writing local files [09:57:42] Completed 285000 out of 1500000 steps (19%) [10:13:41] Timered checkpoint triggered. [10:24:05] Writing local files [10:24:05] Completed 300000 out of 1500000 steps (20%) [10:40:04] Timered checkpoint triggered. [10:50:29] Writing local files [10:50:29] Completed 315000 out of 1500000 steps (21%) [11:06:28] Timered checkpoint triggered. [11:16:52] Writing local files [11:16:52] Completed 330000 out of 1500000 steps (22%) [11:32:51] Timered checkpoint triggered. [11:43:15] Writing local files [11:43:15] Completed 345000 out of 1500000 steps (23%) [11:59:15] Timered checkpoint triggered. [12:09:37] Writing local files [12:09:37] Completed 360000 out of 1500000 steps (24%) [12:25:37] Timered checkpoint triggered. [12:36:01] Writing local files [12:36:01] Completed 375000 out of 1500000 steps (25%) [12:52:01] Timered checkpoint triggered. [13:02:24] Writing local files [13:02:24] Completed 390000 out of 1500000 steps (26%) [13:18:24] Timered checkpoint triggered. [13:28:46] Writing local files [13:28:46] Completed 405000 out of 1500000 steps (27%) [13:44:45] Timered checkpoint triggered. [13:55:09] Writing local files [13:55:09] Completed 420000 out of 1500000 steps (28%) [14:11:09] Timered checkpoint triggered. [14:21:34] Writing local files [14:21:34] Completed 435000 out of 1500000 steps (29%) [14:37:33] Timered checkpoint triggered. [14:39:51] - Autosending finished units... [14:39:51] Trying to send all finished work units [14:39:51] + No unsent completed units remaining. [14:39:51] - Autosend completed [14:47:59] Writing local files [14:47:59] Completed 450000 out of 1500000 steps (30%) [15:03:59] Timered checkpoint triggered. [15:14:25] Writing local files [15:14:25] Completed 465000 out of 1500000 steps (31%) [15:30:25] Timered checkpoint triggered. [15:40:52] Writing local files [15:40:52] Completed 480000 out of 1500000 steps (32%) [15:56:52] Timered checkpoint triggered. [16:07:20] Writing local files [16:07:20] Completed 495000 out of 1500000 steps (33%) [16:23:19] Timered checkpoint triggered. [16:33:48] Writing local files [16:33:48] Completed 510000 out of 1500000 steps (34%) [16:49:48] Timered checkpoint triggered. [17:00:15] Writing local files [17:00:15] Completed 525000 out of 1500000 steps (35%) [17:16:15] Timered checkpoint triggered. [17:26:43] Writing local files [17:26:43] Completed 540000 out of 1500000 steps (36%) [17:42:42] Timered checkpoint triggered. [17:53:08] Writing local files [17:53:08] Completed 555000 out of 1500000 steps (37%) [18:09:08] Timered checkpoint triggered. [18:19:35] Writing local files [18:19:35] Completed 570000 out of 1500000 steps (38%) [18:35:34] Timered checkpoint triggered. [18:46:01] Writing local files [18:46:01] Completed 585000 out of 1500000 steps (39%) [19:02:01] Timered checkpoint triggered. [19:12:26] Writing local files [19:12:26] Completed 600000 out of 1500000 steps (40%) [19:28:26] Timered checkpoint triggered. [19:38:50] Writing local files [19:38:50] Completed 615000 out of 1500000 steps (41%) [19:54:50] Timered checkpoint triggered. [20:05:15] Writing local files [20:05:15] Completed 630000 out of 1500000 steps (42%) [20:21:15] Timered checkpoint triggered. [20:31:41] Writing local files [20:31:41] Completed 645000 out of 1500000 steps (43%) [20:39:51] - Autosending finished units... [20:39:51] Trying to send all finished work units [20:39:51] + No unsent completed units remaining. [20:39:51] - Autosend completed [20:47:41] Timered checkpoint triggered. [20:58:07] Writing local files [20:58:07] Completed 660000 out of 1500000 steps (44%) [21:14:07] Timered checkpoint triggered. [21:24:32] Writing local files [21:24:32] Completed 675000 out of 1500000 steps (45%) [21:40:32] Timered checkpoint triggered. [21:50:58] Writing local files [21:50:58] Completed 690000 out of 1500000 steps (46%) [22:06:57] Timered checkpoint triggered. [22:17:23] Writing local files [22:17:23] Completed 705000 out of 1500000 steps (47%) [22:33:22] Timered checkpoint triggered. [22:43:47] Writing local files [22:43:47] Completed 720000 out of 1500000 steps (48%) [22:59:47] Timered checkpoint triggered. [23:10:10] Writing local files [23:10:10] Completed 735000 out of 1500000 steps (49%) [23:26:09] Timered checkpoint triggered. [23:36:33] Writing local files [23:36:33] Completed 750000 out of 1500000 steps (50%) [23:52:33] Timered checkpoint triggered. [00:02:59] Writing local files [00:02:59] Completed 765000 out of 1500000 steps (51%) [00:18:58] Timered checkpoint triggered. [00:29:23] Writing local files [00:29:23] Completed 780000 out of 1500000 steps (52%) [00:45:23] Timered checkpoint triggered. [00:55:48] Writing local files [00:55:48] Completed 795000 out of 1500000 steps (53%) [01:11:48] Timered checkpoint triggered. [01:22:12] Writing local files [01:22:12] Completed 810000 out of 1500000 steps (54%) [01:38:13] Timered checkpoint triggered. [01:48:37] Writing local files [01:48:37] Completed 825000 out of 1500000 steps (55%) [02:04:37] Timered checkpoint triggered. [02:15:05] Writing local files [02:15:05] Completed 840000 out of 1500000 steps (56%) [02:31:04] Timered checkpoint triggered. [02:39:51] - Autosending finished units... [02:39:51] Trying to send all finished work units [02:39:51] + No unsent completed units remaining. [02:39:51] - Autosend completed [02:41:30] Writing local files [02:41:30] Completed 855000 out of 1500000 steps (57%) [02:57:31] Timered checkpoint triggered. [03:07:56] Writing local files [03:07:56] Completed 870000 out of 1500000 steps (58%) [03:23:57] Timered checkpoint triggered. [03:34:22] Writing local files [03:34:22] Completed 885000 out of 1500000 steps (59%) [03:50:22] Timered checkpoint triggered. [04:00:48] Writing local files [04:00:48] Completed 900000 out of 1500000 steps (60%) [04:16:47] Timered checkpoint triggered. [04:27:12] Writing local files [04:27:12] Completed 915000 out of 1500000 steps (61%) [04:43:12] Timered checkpoint triggered. [04:53:38] Writing local files [04:53:39] Completed 930000 out of 1500000 steps (62%) [05:09:39] Timered checkpoint triggered. [05:20:05] Writing local files [05:20:05] Completed 945000 out of 1500000 steps (63%) [05:36:06] Timered checkpoint triggered. [05:46:34] Writing local files [05:46:34] Completed 960000 out of 1500000 steps (64%) [06:02:33] Timered checkpoint triggered. [06:13:00] Writing local files [06:13:00] Completed 975000 out of 1500000 steps (65%) [06:29:00] Timered checkpoint triggered. [06:39:28] Writing local files [06:39:28] Completed 990000 out of 1500000 steps (66%) [06:55:29] Timered checkpoint triggered. [07:05:56] Writing local files [07:05:56] Completed 1005000 out of 1500000 steps (67%) [07:21:57] Timered checkpoint triggered. [07:32:24] Writing local files [07:32:24] Completed 1020000 out of 1500000 steps (68%) [07:48:24] Timered checkpoint triggered. [07:58:50] Writing local files [07:58:50] Completed 1035000 out of 1500000 steps (69%) [08:14:51] Timered checkpoint triggered. [08:25:17] Writing local files [08:25:17] Completed 1050000 out of 1500000 steps (70%) [08:39:51] - Autosending finished units... [08:39:51] Trying to send all finished work units [08:39:51] + No unsent completed units remaining. [08:39:51] - Autosend completed [08:41:18] Timered checkpoint triggered. [08:51:45] Writing local files [08:51:45] Completed 1065000 out of 1500000 steps (71%) [09:07:46] Timered checkpoint triggered. [09:18:14] Writing local files [09:18:14] Completed 1080000 out of 1500000 steps (72%) [09:34:15] Timered checkpoint triggered. [09:44:43] Writing local files [09:44:43] Completed 1095000 out of 1500000 steps (73%) [10:00:43] Timered checkpoint triggered. [10:11:12] Writing local files [10:11:12] Completed 1110000 out of 1500000 steps (74%) [10:27:13] Timered checkpoint triggered. [10:37:38] Writing local files [10:37:38] Completed 1125000 out of 1500000 steps (75%) [10:53:39] Timered checkpoint triggered. [11:04:03] Writing local files [11:04:03] Completed 1140000 out of 1500000 steps (76%) [11:20:03] Timered checkpoint triggered. [11:30:28] Writing local files [11:30:28] Completed 1155000 out of 1500000 steps (77%) [11:46:29] Timered checkpoint triggered. [11:56:55] Writing local files [11:56:55] Completed 1170000 out of 1500000 steps (78%) [12:12:56] Timered checkpoint triggered. [12:23:22] Writing local files [12:23:22] Completed 1185000 out of 1500000 steps (79%) [12:39:22] Timered checkpoint triggered. [12:49:48] Writing local files [12:49:48] Completed 1200000 out of 1500000 steps (80%) [13:05:49] Timered checkpoint triggered. [13:16:13] Writing local files [13:16:13] Completed 1215000 out of 1500000 steps (81%) [13:32:14] Timered checkpoint triggered. [13:42:38] Writing local files [13:42:38] Completed 1230000 out of 1500000 steps (82%) [13:58:39] Timered checkpoint triggered. [14:09:03] Writing local files [14:09:03] Completed 1245000 out of 1500000 steps (83%) [14:25:03] Timered checkpoint triggered. [14:35:28] Writing local files [14:35:28] Completed 1260000 out of 1500000 steps (84%) [14:39:51] - Autosending finished units... [14:39:51] Trying to send all finished work units [14:39:51] + No unsent completed units remaining. [14:39:51] - Autosend completed [14:51:28] Timered checkpoint triggered. [15:01:53] Writing local files [15:01:53] Completed 1275000 out of 1500000 steps (85%) [15:17:53] Timered checkpoint triggered. [15:28:19] Writing local files [15:28:19] Completed 1290000 out of 1500000 steps (86%) [15:44:18] Timered checkpoint triggered. [15:54:44] Writing local files [15:54:44] Completed 1305000 out of 1500000 steps (87%) [16:10:44] Timered checkpoint triggered. [16:21:11] Writing local files [16:21:11] Completed 1320000 out of 1500000 steps (88%) [16:37:11] Timered checkpoint triggered. [16:47:35] Writing local files [16:47:35] Completed 1335000 out of 1500000 steps (89%) [17:03:35] Timered checkpoint triggered. [17:14:01] Writing local files [17:14:01] Completed 1350000 out of 1500000 steps (90%) [17:30:01] Timered checkpoint triggered. [17:40:28] Writing local files [17:40:28] Completed 1365000 out of 1500000 steps (91%) [17:56:28] Timered checkpoint triggered. [18:06:55] Writing local files [18:06:55] Completed 1380000 out of 1500000 steps (92%) [18:22:55] Timered checkpoint triggered. [18:33:22] Writing local files [18:33:22] Completed 1395000 out of 1500000 steps (93%) [18:49:21] Timered checkpoint triggered. [18:59:50] Writing local files [18:59:50] Completed 1410000 out of 1500000 steps (94%) [19:15:50] Timered checkpoint triggered. [19:26:21] Writing local files [19:26:21] Completed 1425000 out of 1500000 steps (95%) [19:42:21] Timered checkpoint triggered. [19:52:50] Writing local files [19:52:50] Completed 1440000 out of 1500000 steps (96%) [20:08:50] Timered checkpoint triggered. [20:19:18] Writing local files [20:19:18] Completed 1455000 out of 1500000 steps (97%) [20:35:18] Timered checkpoint triggered. [20:39:51] - Autosending finished units... [20:39:51] Trying to send all finished work units [20:39:51] + No unsent completed units remaining. [20:39:51] - Autosend completed [20:45:47] Writing local files [20:45:47] Completed 1470000 out of 1500000 steps (98%) [21:01:47] Timered checkpoint triggered. [21:12:16] Writing local files [21:12:16] Completed 1485000 out of 1500000 steps (99%) [21:28:15] Timered checkpoint triggered. [21:38:44] Writing local files [21:38:44] Completed 1500000 out of 1500000 steps (100%) [21:38:44] Writing final coordinates. [21:38:44] Past main M.D. loop [21:39:45] [21:39:45] Finished Work Unit: [21:39:45] - Reading up to 356664 from "work/wudata_00.arc": Read 356664 [21:39:45] - Reading up to 3842504 from "work/wudata_00.xtc": Read 3842504 [21:39:45] goefile size: 0 [21:39:45] logfile size: 14976 [21:39:45] Leaving Run [21:39:45] - Writing 4857148 bytes of core data to disk... [21:39:50] Done: 4856636 -> 4185478 (compressed to 86.1 percent) [21:39:50] ... Done. [21:39:50] - Shutting down core [21:39:50] [21:39:50] Folding@home Core Shutdown: FINISHED_UNIT [21:39:50] CoreStatus = 64 (100) [21:39:50] Unit 0 finished with 96 percent of time to deadline remaining. [21:39:50] Updated performance fraction: 0.972360 [21:39:50] Sending work to server [21:39:50] - Read packet limit of 540015616... Set to 524286976. [21:39:50] + Attempting to send results [21:39:50] - Reading file work/wuresults_00.dat from core [21:39:50] (Read 4185990 bytes from disk) [21:39:50] Connecting to http://171.64.65.111:8080/ [21:40:22] Posted data. [21:40:22] Initial: 0000; - Uploaded at ~123 kB/s [21:40:23] - Averaged speed for that direction ~106 kB/s [21:40:23] + Results successfully sent [21:40:23] Thank you for your contribution to Folding@Home. [21:40:23] + Number of Units Completed: 20 [21:40:23] Trying to send all finished work units [21:40:23] + No unsent completed units remaining. [21:40:23] - Preparing to get new work unit... [21:40:23] + Attempting to get work packet [21:40:23] - Will indicate memory of 241 MB [21:40:23] - Connecting to assignment server [21:40:23] Connecting to http://assign.stanford.edu:8080/ [21:43:32] - Couldn't send HTTP request to server [21:43:32] + Could not connect to Assignment Server [21:43:32] Connecting to http://assign2.stanford.edu:80/ [21:43:32] Posted data. [21:43:32] Initial: 40AB; - Successful: assigned to (171.64.122.72). [21:43:32] + News From Folding@Home: Welcome to Folding@Home [21:43:32] Loaded queue successfully. [21:43:32] Connecting to http://171.64.122.72:80/ [21:43:32] - Couldn't send HTTP request to server [21:43:32] (Got status 503) [21:43:32] + Could not connect to Work Server [21:43:32] - Attempt #1 to get work failed, and no other work to do. Waiting before retry. [21:43:42] + Attempting to get work packet [21:43:42] - Will indicate memory of 241 MB [21:43:42] - Connecting to assignment server [21:43:42] Connecting to http://assign.stanford.edu:8080/ [21:48:22] - Couldn't send HTTP request to server [21:48:22] + Could not connect to Assignment Server [21:48:22] Connecting to http://assign2.stanford.edu:80/ [21:48:22] Posted data. [21:48:22] Initial: 40AB; - Successful: assigned to (171.64.65.111). [21:48:22] + News From Folding@Home: Welcome to Folding@Home [21:48:22] Loaded queue successfully. [21:48:22] Connecting to http://171.64.65.111:80/ [21:48:23] Posted data. [21:48:23] Initial: 0000; - Receiving payload (expected size: 469830) [21:48:25] - Downloaded at ~229 kB/s [21:48:25] - Averaged speed for that direction ~152 kB/s [21:48:25] + Received work. [21:48:25] Trying to send all finished work units [21:48:25] + No unsent completed units remaining. [21:48:25] + Closed connections [21:48:25] [21:48:25] + Processing work unit [21:48:25] Core required: FahCore_81.exe [21:48:25] Core found. [21:48:25] Working on Unit 01 [November 21 21:48:25] [21:48:25] + Working ... [21:48:25] - Calling './FahCore_81.exe -dir work/ -suffix 01 -checkpoint 15 -forceasm -verbose -lifeline 472 -version 602' [21:48:25] [21:48:25] *------------------------------* [21:48:25] Folding@Home Gromacs Simulated Tempering Core [21:48:25] Version 1.00 (Dec 9, 2006) [21:48:25] [21:48:25] Preparing to commence simulation [21:48:25] - Assembly optimizations manually forced on. [21:48:25] - Not checking prior termination. [21:48:25] - Expanded 469318 -> 2292789 (decompressed 488.5 percent) [21:48:25] - Starting from initial work packet [21:48:25] [21:48:25] Project: 4100 (Run 81, Clone 17, Gen 15) [21:48:25] [21:48:25] Assembly optimizations on if available. [21:48:25] Entering M.D. [21:48:31] Protein: p4100_villinwt_folded_Amber03_Native [21:48:31] [21:48:31] Writing local files [21:48:31] Extra SSE boost OK. [21:48:31] Writing local files [21:48:32] Completed 0 out of 1500000 steps (0%) [22:04:25] Timered checkpoint triggered. [22:16:10] Writing local files [22:16:10] Completed 15000 out of 1500000 steps (1%) [22:32:09] Timered checkpoint triggered. [22:43:47] Writing local files [22:43:47] Completed 30000 out of 1500000 steps (2%) [22:59:47] Timered checkpoint triggered. [23:11:24] Writing local files [23:11:24] Completed 45000 out of 1500000 steps (3%) [23:27:24] Timered checkpoint triggered. [23:38:59] Writing local files [23:38:59] Completed 60000 out of 1500000 steps (4%) [23:54:59] Timered checkpoint triggered. [00:06:35] Writing local files [00:06:35] Completed 75000 out of 1500000 steps (5%) [00:22:36] Timered checkpoint triggered. [00:34:12] Writing local files [00:34:12] Completed 90000 out of 1500000 steps (6%) [00:50:12] Timered checkpoint triggered. [01:01:49] Writing local files [01:01:49] Completed 105000 out of 1500000 steps (7%) [01:17:49] Timered checkpoint triggered. [01:29:27] Writing local files [01:29:27] Completed 120000 out of 1500000 steps (8%) [01:45:27] Timered checkpoint triggered. [01:57:03] Writing local files [01:57:03] Completed 135000 out of 1500000 steps (9%) [02:13:03] Timered checkpoint triggered. [02:24:39] Writing local files [02:24:39] Completed 150000 out of 1500000 steps (10%) [02:39:51] - Autosending finished units... [02:39:51] Trying to send all finished work units [02:39:51] + No unsent completed units remaining. [02:39:51] - Autosend completed [02:40:39] Timered checkpoint triggered. [02:52:15] Writing local files [02:52:15] Completed 165000 out of 1500000 steps (11%) [03:08:16] Timered checkpoint triggered. [03:19:50] Writing local files [03:19:50] Completed 180000 out of 1500000 steps (12%) [03:35:51] Timered checkpoint triggered. [03:47:24] Writing local files [03:47:24] Completed 195000 out of 1500000 steps (13%)