[06:06:00] Writing local files [06:06:00] Extra SSE boost OK. [06:06:00] Writing local files [06:06:00] Completed 0 out of 1500000 steps (0%) [06:21:53] Timered checkpoint triggered. [06:31:57] Writing local files [06:31:57] Completed 15000 out of 1500000 steps (1%) [06:47:58] Timered checkpoint triggered. [06:57:54] Writing local files [06:57:54] Completed 30000 out of 1500000 steps (2%) [07:13:55] Timered checkpoint triggered. [07:23:50] Writing local files [07:23:50] Completed 45000 out of 1500000 steps (3%) [07:39:51] Timered checkpoint triggered. [07:49:49] Writing local files [07:49:49] Completed 60000 out of 1500000 steps (4%) [08:05:49] Timered checkpoint triggered. [08:15:47] Writing local files [08:15:47] Completed 75000 out of 1500000 steps (5%) [08:31:47] Timered checkpoint triggered. [08:41:45] Writing local files [08:41:45] Completed 90000 out of 1500000 steps (6%) [08:57:46] Timered checkpoint triggered. [09:07:42] Writing local files [09:07:42] Completed 105000 out of 1500000 steps (7%) [09:23:43] Timered checkpoint triggered. [09:33:40] Writing local files [09:33:40] Completed 120000 out of 1500000 steps (8%) [09:49:41] Timered checkpoint triggered. [09:59:37] Writing local files [09:59:37] Completed 135000 out of 1500000 steps (9%) [10:12:31] - Autosending finished units... [10:12:31] Trying to send all finished work units [10:12:31] + No unsent completed units remaining. [10:12:31] - Autosend completed [10:15:38] Timered checkpoint triggered. [10:25:36] Writing local files [10:25:36] Completed 150000 out of 1500000 steps (10%) [10:41:36] Timered checkpoint triggered. [10:51:33] Writing local files [10:51:33] Completed 165000 out of 1500000 steps (11%) [11:07:34] Timered checkpoint triggered. [11:17:30] Writing local files [11:17:30] Completed 180000 out of 1500000 steps (12%) [11:33:30] Timered checkpoint triggered. [11:43:26] Writing local files [11:43:26] Completed 195000 out of 1500000 steps (13%) [11:59:27] Timered checkpoint triggered. [12:09:22] Writing local files [12:09:22] Completed 210000 out of 1500000 steps (14%) [12:25:22] Timered checkpoint triggered. [12:35:19] Writing local files [12:35:19] Completed 225000 out of 1500000 steps (15%) [12:51:19] Timered checkpoint triggered. [13:01:15] Writing local files [13:01:15] Completed 240000 out of 1500000 steps (16%) [13:17:15] Timered checkpoint triggered. [13:27:13] Writing local files [13:27:13] Completed 255000 out of 1500000 steps (17%) [13:43:12] Timered checkpoint triggered. [13:53:10] Writing local files [13:53:10] Completed 270000 out of 1500000 steps (18%) [14:09:10] Timered checkpoint triggered. [14:19:07] Writing local files [14:19:07] Completed 285000 out of 1500000 steps (19%) [14:35:07] Timered checkpoint triggered. [14:45:04] Writing local files [14:45:04] Completed 300000 out of 1500000 steps (20%) [15:01:04] Timered checkpoint triggered. [15:11:00] Writing local files [15:11:00] Completed 315000 out of 1500000 steps (21%) [15:27:00] Timered checkpoint triggered. [15:36:57] Writing local files [15:36:57] Completed 330000 out of 1500000 steps (22%) [15:52:57] Timered checkpoint triggered. [16:02:53] Writing local files [16:02:53] Completed 345000 out of 1500000 steps (23%) [16:12:31] - Autosending finished units... [16:12:31] Trying to send all finished work units [16:12:31] + No unsent completed units remaining. [16:12:31] - Autosend completed [16:18:53] Timered checkpoint triggered. [16:28:48] Writing local files [16:28:48] Completed 360000 out of 1500000 steps (24%) [16:44:48] Timered checkpoint triggered. [16:54:45] Writing local files [16:54:45] Completed 375000 out of 1500000 steps (25%) [17:10:45] Timered checkpoint triggered. [17:20:42] Writing local files [17:20:42] Completed 390000 out of 1500000 steps (26%) [17:36:42] Timered checkpoint triggered. [17:46:39] Writing local files [17:46:39] Completed 405000 out of 1500000 steps (27%) [18:02:39] Timered checkpoint triggered. [18:12:37] Writing local files [18:12:37] Completed 420000 out of 1500000 steps (28%) [18:28:37] Timered checkpoint triggered. [18:38:34] Writing local files [18:38:34] Completed 435000 out of 1500000 steps (29%) [18:54:34] Timered checkpoint triggered. [19:04:31] Writing local files [19:04:31] Completed 450000 out of 1500000 steps (30%) [19:20:31] Timered checkpoint triggered. [19:30:27] Writing local files [19:30:28] Completed 465000 out of 1500000 steps (31%) [19:46:27] Timered checkpoint triggered. [19:56:25] Writing local files [19:56:25] Completed 480000 out of 1500000 steps (32%) [20:12:25] Timered checkpoint triggered. [20:22:22] Writing local files [20:22:22] Completed 495000 out of 1500000 steps (33%) [20:38:22] Timered checkpoint triggered. [20:48:19] Writing local files [20:48:19] Completed 510000 out of 1500000 steps (34%) [21:04:19] Timered checkpoint triggered. [21:14:16] Writing local files [21:14:16] Completed 525000 out of 1500000 steps (35%) [21:30:16] Timered checkpoint triggered. [21:40:15] Writing local files [21:40:15] Completed 540000 out of 1500000 steps (36%) [21:56:14] Timered checkpoint triggered. [22:06:12] Writing local files [22:06:12] Completed 555000 out of 1500000 steps (37%) [22:12:31] - Autosending finished units... [22:12:31] Trying to send all finished work units [22:12:31] + No unsent completed units remaining. [22:12:31] - Autosend completed [22:22:11] Timered checkpoint triggered. [22:32:08] Writing local files [22:32:08] Completed 570000 out of 1500000 steps (38%) [22:48:09] Timered checkpoint triggered. [22:58:05] Writing local files [22:58:05] Completed 585000 out of 1500000 steps (39%) [23:14:06] Timered checkpoint triggered. [23:24:01] Writing local files [23:24:01] Completed 600000 out of 1500000 steps (40%) [23:40:01] Timered checkpoint triggered. [23:49:59] Writing local files [23:49:59] Completed 615000 out of 1500000 steps (41%) [00:05:59] Timered checkpoint triggered. [00:15:56] Writing local files [00:15:56] Completed 630000 out of 1500000 steps (42%) [00:31:56] Timered checkpoint triggered. [00:41:54] Writing local files [00:41:54] Completed 645000 out of 1500000 steps (43%) [00:57:54] Timered checkpoint triggered. [01:07:52] Writing local files [01:07:52] Completed 660000 out of 1500000 steps (44%) [01:23:52] Timered checkpoint triggered. [01:33:48] Writing local files [01:33:49] Completed 675000 out of 1500000 steps (45%) [01:49:49] Timered checkpoint triggered. [01:59:44] Writing local files [01:59:44] Completed 690000 out of 1500000 steps (46%) [02:15:45] Timered checkpoint triggered. [02:25:39] Writing local files [02:25:39] Completed 705000 out of 1500000 steps (47%) [02:41:40] Timered checkpoint triggered. [02:51:36] Writing local files [02:51:36] Completed 720000 out of 1500000 steps (48%) [03:07:36] Timered checkpoint triggered. [03:17:31] Writing local files [03:17:31] Completed 735000 out of 1500000 steps (49%) [03:33:32] Timered checkpoint triggered. [03:43:27] Writing local files [03:43:27] Completed 750000 out of 1500000 steps (50%) [03:59:27] Timered checkpoint triggered. [04:09:24] Writing local files [04:09:24] Completed 765000 out of 1500000 steps (51%) [04:12:31] - Autosending finished units... [04:12:31] Trying to send all finished work units [04:12:31] + No unsent completed units remaining. [04:12:31] - Autosend completed [04:25:24] Timered checkpoint triggered. [04:35:22] Writing local files [04:35:22] Completed 780000 out of 1500000 steps (52%) [04:51:22] Timered checkpoint triggered. [05:01:19] Writing local files [05:01:19] Completed 795000 out of 1500000 steps (53%) [05:17:20] Timered checkpoint triggered. [05:27:16] Writing local files [05:27:16] Completed 810000 out of 1500000 steps (54%) [05:43:17] Timered checkpoint triggered. [05:53:13] Writing local files [05:53:13] Completed 825000 out of 1500000 steps (55%) [06:09:14] Timered checkpoint triggered. [06:19:09] Writing local files [06:19:09] Completed 840000 out of 1500000 steps (56%) [06:35:10] Timered checkpoint triggered. [06:45:07] Writing local files [06:45:07] Completed 855000 out of 1500000 steps (57%) [07:01:07] Timered checkpoint triggered. [07:11:04] Writing local files [07:11:04] Completed 870000 out of 1500000 steps (58%) [07:27:04] Timered checkpoint triggered. [07:37:01] Writing local files [07:37:01] Completed 885000 out of 1500000 steps (59%) [07:53:02] Timered checkpoint triggered. [08:02:58] Writing local files [08:02:58] Completed 900000 out of 1500000 steps (60%) [08:18:59] Timered checkpoint triggered. [08:28:54] Writing local files [08:28:54] Completed 915000 out of 1500000 steps (61%) [08:44:55] Timered checkpoint triggered. [08:54:51] Writing local files [08:54:51] Completed 930000 out of 1500000 steps (62%) [09:10:52] Timered checkpoint triggered. [09:20:48] Writing local files [09:20:48] Completed 945000 out of 1500000 steps (63%) [09:36:49] Timered checkpoint triggered. [09:46:45] Writing local files [09:46:45] Completed 960000 out of 1500000 steps (64%) [10:02:46] Timered checkpoint triggered. [10:12:31] - Autosending finished units... [10:12:31] Trying to send all finished work units [10:12:31] + No unsent completed units remaining. [10:12:31] - Autosend completed [10:12:43] Writing local files [10:12:43] Completed 975000 out of 1500000 steps (65%) [10:28:43] Timered checkpoint triggered. [10:38:40] Writing local files [10:38:40] Completed 990000 out of 1500000 steps (66%) [10:54:41] Timered checkpoint triggered. [11:04:36] Writing local files [11:04:36] Completed 1005000 out of 1500000 steps (67%) [11:20:36] Timered checkpoint triggered. [11:30:33] Writing local files [11:30:33] Completed 1020000 out of 1500000 steps (68%) [11:46:33] Timered checkpoint triggered. [11:56:30] Writing local files [11:56:30] Completed 1035000 out of 1500000 steps (69%) [12:12:30] Timered checkpoint triggered. [12:22:26] Writing local files [12:22:27] Completed 1050000 out of 1500000 steps (70%) [12:38:26] Timered checkpoint triggered. [12:48:24] Writing local files [12:48:24] Completed 1065000 out of 1500000 steps (71%) [13:04:23] Timered checkpoint triggered. [13:14:20] Writing local files [13:14:20] Completed 1080000 out of 1500000 steps (72%) [13:30:20] Timered checkpoint triggered. [13:40:18] Writing local files [13:40:18] Completed 1095000 out of 1500000 steps (73%) [13:56:18] Timered checkpoint triggered. [14:06:14] Writing local files [14:06:14] Completed 1110000 out of 1500000 steps (74%) [14:22:14] Timered checkpoint triggered. [14:32:12] Writing local files [14:32:12] Completed 1125000 out of 1500000 steps (75%) [14:48:12] Timered checkpoint triggered. [14:58:09] Writing local files [14:58:09] Completed 1140000 out of 1500000 steps (76%) [15:14:09] Timered checkpoint triggered. [15:24:05] Writing local files [15:24:05] Completed 1155000 out of 1500000 steps (77%) [15:40:05] Timered checkpoint triggered. [15:50:02] Writing local files [15:50:02] Completed 1170000 out of 1500000 steps (78%) [16:06:01] Timered checkpoint triggered. [16:12:31] - Autosending finished units... [16:12:31] Trying to send all finished work units [16:12:31] + No unsent completed units remaining. [16:12:31] - Autosend completed [16:15:59] Writing local files [16:15:59] Completed 1185000 out of 1500000 steps (79%) [16:31:59] Timered checkpoint triggered. [16:41:58] Writing local files [16:41:58] Completed 1200000 out of 1500000 steps (80%) [16:57:58] Timered checkpoint triggered. [17:07:54] Writing local files [17:07:55] Completed 1215000 out of 1500000 steps (81%) [17:23:54] Timered checkpoint triggered. [17:33:51] Writing local files [17:33:51] Completed 1230000 out of 1500000 steps (82%) [17:49:51] Timered checkpoint triggered. [17:59:49] Writing local files [17:59:49] Completed 1245000 out of 1500000 steps (83%) [18:15:49] Timered checkpoint triggered. [18:25:46] Writing local files [18:25:46] Completed 1260000 out of 1500000 steps (84%) [18:41:46] Timered checkpoint triggered. [18:51:44] Writing local files [18:51:44] Completed 1275000 out of 1500000 steps (85%) [19:07:44] Timered checkpoint triggered. [19:17:42] Writing local files [19:17:42] Completed 1290000 out of 1500000 steps (86%) [19:33:42] Timered checkpoint triggered. [19:43:40] Writing local files [19:43:40] Completed 1305000 out of 1500000 steps (87%) [19:59:40] Timered checkpoint triggered. [20:09:36] Writing local files [20:09:36] Completed 1320000 out of 1500000 steps (88%) [20:25:36] Timered checkpoint triggered. [20:35:33] Writing local files [20:35:33] Completed 1335000 out of 1500000 steps (89%) [20:51:33] Timered checkpoint triggered. [21:01:30] Writing local files [21:01:30] Completed 1350000 out of 1500000 steps (90%) [21:17:30] Timered checkpoint triggered. [21:27:27] Writing local files [21:27:27] Completed 1365000 out of 1500000 steps (91%) [21:43:26] Timered checkpoint triggered. [21:53:24] Writing local files [21:53:24] Completed 1380000 out of 1500000 steps (92%) [22:09:24] Timered checkpoint triggered. [22:12:31] - Autosending finished units... [22:12:31] Trying to send all finished work units [22:12:31] + No unsent completed units remaining. [22:12:31] - Autosend completed [22:19:21] Writing local files [22:19:21] Completed 1395000 out of 1500000 steps (93%) [22:35:21] Timered checkpoint triggered. [22:45:18] Writing local files [22:45:18] Completed 1410000 out of 1500000 steps (94%) [23:01:18] Timered checkpoint triggered. [23:11:16] Writing local files [23:11:16] Completed 1425000 out of 1500000 steps (95%) [23:27:16] Timered checkpoint triggered. [23:37:14] Writing local files [23:37:14] Completed 1440000 out of 1500000 steps (96%) [23:53:15] Timered checkpoint triggered. [00:03:12] Writing local files [00:03:12] Completed 1455000 out of 1500000 steps (97%) [00:19:13] Timered checkpoint triggered. [00:29:08] Writing local files [00:29:09] Completed 1470000 out of 1500000 steps (98%) [00:45:09] Timered checkpoint triggered. [00:55:05] Writing local files [00:55:05] Completed 1485000 out of 1500000 steps (99%) [01:11:05] Timered checkpoint triggered. [01:21:01] Writing local files [01:21:01] Completed 1500000 out of 1500000 steps (100%) [01:21:01] Writing final coordinates. [01:21:02] Past main M.D. loop [01:22:02] [01:22:02] Finished Work Unit: [01:22:02] - Reading up to 356664 from "work/wudata_04.arc": Read 356664 [01:22:02] - Reading up to 3846328 from "work/wudata_04.xtc": Read 3846328 [01:22:02] goefile size: 0 [01:22:02] logfile size: 14976 [01:22:02] Leaving Run [01:22:03] - Writing 4852703 bytes of core data to disk... [01:22:07] Done: 4852191 -> 4188541 (compressed to 86.3 percent) [01:22:07] ... Done. [01:22:07] - Shutting down core [01:22:07] [01:22:07] Folding@home Core Shutdown: FINISHED_UNIT [01:22:07] CoreStatus = 64 (100) [01:22:07] Unit 4 finished with 96 percent of time to deadline remaining. [01:22:07] Updated performance fraction: 0.972704 [01:22:07] Sending work to server [01:22:07] - Read packet limit of 540015616... Set to 524286976. [01:22:07] + Attempting to send results [01:22:07] - Reading file work/wuresults_04.dat from core [01:22:07] (Read 4189053 bytes from disk) [01:22:07] Connecting to http://171.64.65.111:8080/ [01:22:16] - Couldn't send HTTP request to server [01:22:16] + Could not connect to Work Server (results) [01:22:16] (171.64.65.111:8080) [01:22:16] - Error: Could not transmit unit 04 (completed November 22) to work server. [01:22:16] - 1 failed uploads of this unit. [01:22:16] Keeping unit 04 in queue. [01:22:16] Trying to send all finished work units [01:22:16] - Read packet limit of 540015616... Set to 524286976. [01:22:16] + Attempting to send results [01:22:16] - Reading file work/wuresults_04.dat from core [01:22:16] (Read 4189053 bytes from disk) [01:22:16] Connecting to http://171.64.65.111:8080/ [01:22:51] Posted data. [01:22:51] Initial: 0000; - Uploaded at ~113 kB/s [01:22:52] - Averaged speed for that direction ~104 kB/s [01:22:52] + Results successfully sent [01:22:52] Thank you for your contribution to Folding@Home. [01:22:52] + Number of Units Completed: 21 [01:22:52] + Sent 1 of 1 completed units to the server [01:22:52] - Preparing to get new work unit... [01:22:52] + Attempting to get work packet [01:22:52] - Will indicate memory of 233 MB [01:22:52] - Connecting to assignment server [01:22:52] Connecting to http://assign.stanford.edu:8080/ [01:22:52] - Couldn't send HTTP request to server [01:22:52] + Could not connect to Assignment Server [01:22:52] Connecting to http://assign2.stanford.edu:80/ [01:22:52] Posted data. [01:22:52] Initial: 0000; + No appropriate work server was available; will try again in a bit. [01:22:52] + Couldn't get work instructions. [01:22:52] - Attempt #1 to get work failed, and no other work to do. Waiting before retry. [01:23:05] + Attempting to get work packet [01:23:05] - Will indicate memory of 233 MB [01:23:05] - Connecting to assignment server [01:23:05] Connecting to http://assign.stanford.edu:8080/ [01:23:05] - Couldn't send HTTP request to server [01:23:05] + Could not connect to Assignment Server [01:23:05] Connecting to http://assign2.stanford.edu:80/ [01:23:05] Posted data. [01:23:05] Initial: 0000; + No appropriate work server was available; will try again in a bit. [01:23:05] + Couldn't get work instructions. [01:23:05] - Attempt #2 to get work failed, and no other work to do. Waiting before retry. [01:23:29] + Attempting to get work packet [01:23:29] - Will indicate memory of 233 MB [01:23:29] - Connecting to assignment server [01:23:29] Connecting to http://assign.stanford.edu:8080/ [01:23:29] - Couldn't send HTTP request to server [01:23:29] + Could not connect to Assignment Server [01:23:29] Connecting to http://assign2.stanford.edu:80/ [01:23:30] Posted data. [01:23:30] Initial: 0000; + No appropriate work server was available; will try again in a bit. [01:23:30] + Couldn't get work instructions. [01:23:30] - Attempt #3 to get work failed, and no other work to do. Waiting before retry. [01:23:57] + Attempting to get work packet [01:23:57] - Will indicate memory of 233 MB [01:23:57] - Connecting to assignment server [01:23:57] Connecting to http://assign.stanford.edu:8080/ [01:23:57] - Couldn't send HTTP request to server [01:23:57] + Could not connect to Assignment Server [01:23:57] Connecting to http://assign2.stanford.edu:80/ [01:23:57] Posted data. [01:23:57] Initial: 0000; + No appropriate work server was available; will try again in a bit. [01:23:57] + Couldn't get work instructions. [01:23:57] - Attempt #4 to get work failed, and no other work to do. Waiting before retry. [01:24:40] + Attempting to get work packet [01:24:40] - Will indicate memory of 233 MB [01:24:40] - Connecting to assignment server [01:24:40] Connecting to http://assign.stanford.edu:8080/ [01:24:40] - Couldn't send HTTP request to server [01:24:40] + Could not connect to Assignment Server [01:24:40] Connecting to http://assign2.stanford.edu:80/ [01:24:40] Posted data. [01:24:40] Initial: 0000; + No appropriate work server was available; will try again in a bit. [01:24:40] + Couldn't get work instructions. [01:24:40] - Attempt #5 to get work failed, and no other work to do. Waiting before retry. [01:26:14] + Attempting to get work packet [01:26:14] - Will indicate memory of 233 MB [01:26:14] - Connecting to assignment server [01:26:14] Connecting to http://assign.stanford.edu:8080/ [01:26:15] Posted data. [01:26:15] Initial: 40AB; - Successful: assigned to (171.64.65.111). [01:26:15] + News From Folding@Home: Welcome to Folding@Home [01:26:15] Loaded queue successfully. [01:26:15] Connecting to http://171.64.65.111:8080/ [01:26:16] Posted data. [01:26:16] Initial: 0000; - Receiving payload (expected size: 532788) [01:26:18] - Downloaded at ~260 kB/s [01:26:18] - Averaged speed for that direction ~147 kB/s [01:26:18] + Received work. [01:26:18] Trying to send all finished work units [01:26:18] + No unsent completed units remaining. [01:26:18] + Closed connections [01:26:18] [01:26:18] + Processing work unit [01:26:18] Core required: FahCore_81.exe [01:26:18] Core found. [01:26:18] Working on Unit 05 [November 22 01:26:18] [01:26:18] + Working ... [01:26:18] - Calling './FahCore_81.exe -dir work/ -suffix 05 -checkpoint 15 -forceasm -verbose -lifeline 475 -version 602' [01:26:18] [01:26:18] *------------------------------* [01:26:18] Folding@Home Gromacs Simulated Tempering Core [01:26:18] Version 1.00 (Dec 9, 2006) [01:26:18] [01:26:18] Preparing to commence simulation [01:26:18] - Assembly optimizations manually forced on. [01:26:18] - Not checking prior termination. [01:26:19] - Expanded 532276 -> 2603669 (decompressed 489.1 percent) [01:26:19] - Starting from initial work packet [01:26:19] [01:26:19] Project: 4109 (Run 105, Clone 1, Gen 24) [01:26:19] [01:26:19] Assembly optimizations on if available. [01:26:19] Entering M.D. [01:26:25] Protein: p4109_wwmouse_unf_Amber03_Extended [01:26:25] [01:26:25] Writing local files [01:26:25] Extra SSE boost OK. [01:26:25] Writing local files [01:26:25] Completed 0 out of 1500000 steps (0%) [01:42:19] Timered checkpoint triggered. [01:57:51] Writing local files [01:57:51] Completed 15000 out of 1500000 steps (1%) [02:13:52] Timered checkpoint triggered. [02:29:18] Writing local files [02:29:18] Completed 30000 out of 1500000 steps (2%) [02:45:19] Timered checkpoint triggered. [03:00:42] Writing local files [03:00:42] Completed 45000 out of 1500000 steps (3%) [03:16:42] Timered checkpoint triggered. [03:32:07] Writing local files [03:32:07] Completed 60000 out of 1500000 steps (4%) [03:48:07] Timered checkpoint triggered.